STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ43235.1Protein of unknown function. (137 aa)    
Predicted Functional Partners:
SJZ43296.1
Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.
 
     0.812
SJZ43252.1
Protein of unknown function.
       0.773
SJZ43278.1
Hypothetical protein.
       0.773
SJZ43322.1
Protein gp37.
       0.558
SJZ43340.1
Protein N-acetyltransferase, RimJ/RimL family.
       0.558
SJZ43577.1
Protoporphyrinogen IX oxidase, menaquinone-dependent (flavodoxin domain).
  
     0.492
SJZ98953.1
Protein-S-isoprenylcysteine O-methyltransferase Ste14.
  
     0.475
SJZ55288.1
ABC-2 type transport system permease protein.
  
     0.430
Your Current Organism:
Anaerorhabdus furcosa
NCBI taxonomy Id: 118967
Other names: A. furcosa, ATCC 25662, Bacillus furcosus, Bacteroides furcosus, Fusiformis furcosus, Pseudobacterium furcosum, Ristella furcosa, VPI 3253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.