STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ70594.1Uncharacterized lipoprotein YddW, UPF0748 family. (377 aa)    
Predicted Functional Partners:
SJZ70619.1
Hypothetical protein.
       0.773
SJZ70643.1
XTP/dITP diphosphohydrolase.
       0.581
rsmG
16S rRNA (guanine527-N7)-methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
       0.515
SJZ70500.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
       0.503
SJZ70424.1
Hypothetical protein.
 
     0.498
SJZ70473.1
Chromosome partitioning protein.
       0.490
SJZ70454.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
       0.485
mnmG
tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
       0.445
SJZ70670.1
Hypothetical protein.
       0.440
Your Current Organism:
Anaerorhabdus furcosa
NCBI taxonomy Id: 118967
Other names: A. furcosa, ATCC 25662, Bacillus furcosus, Bacteroides furcosus, Fusiformis furcosus, Pseudobacterium furcosum, Ristella furcosa, VPI 3253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.