STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ79424.1Osmoprotectant transport system ATP-binding protein. (396 aa)    
Predicted Functional Partners:
SJZ79388.1
Osmoprotectant transport system substrate-binding protein.
 0.998
SJZ79339.1
Osmoprotectant transport system permease protein.
 0.995
SJZ79396.1
Osmoprotectant transport system permease protein.
 0.995
SJZ40287.1
ABC-2 type transport system ATP-binding protein.
    
0.903
SJZ55251.1
ABC-2 type transport system ATP-binding protein.
     
0.899
SJZ55190.1
ABC-2 type transport system ATP-binding protein.
     
0.885
SJZ36252.1
Putative ABC transport system permease protein.
      0.773
SJZ53667.1
Putative ABC transport system permease protein.
      0.703
SJZ55626.1
Putative ABC transport system permease protein.
      0.680
SJZ35018.1
iron(III) transport system permease protein.
    
  0.632
Your Current Organism:
Anaerorhabdus furcosa
NCBI taxonomy Id: 118967
Other names: A. furcosa, ATCC 25662, Bacillus furcosus, Bacteroides furcosus, Fusiformis furcosus, Pseudobacterium furcosum, Ristella furcosa, VPI 3253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.