STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ84388.1Transcriptional regulator, LytTR family. (145 aa)    
Predicted Functional Partners:
SJZ84354.1
Multidrug/hemolysin transport system permease protein.
 
    0.866
SJZ84380.1
Hypothetical protein.
       0.768
SJZ84372.1
Multidrug/hemolysin transport system ATP-binding protein.
 
    0.761
SJZ39284.1
Transcriptional regulator, LytTR family.
  
     0.751
SJZ40173.1
Histidine kinase.
 
 0.688
SJZ40205.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.678
SJZ56602.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 0.629
SJZ78597.1
Extracellular solute-binding protein, family 3.
  
 
 0.619
SJZ35127.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 0.605
SJZ56622.1
Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains.
  
  
  0.523
Your Current Organism:
Anaerorhabdus furcosa
NCBI taxonomy Id: 118967
Other names: A. furcosa, ATCC 25662, Bacillus furcosus, Bacteroides furcosus, Fusiformis furcosus, Pseudobacterium furcosum, Ristella furcosa, VPI 3253
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