Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SJZ37694.1 | SJZ84949.1 | SAMN02745191_0326 | SAMN02745191_1820 | Single-strand DNA-binding protein. | single-stranded-DNA-specific exonuclease. | 0.801 |
| SJZ37694.1 | polA | SAMN02745191_0326 | SAMN02745191_1864 | Single-strand DNA-binding protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.690 |
| SJZ37694.1 | topA | SAMN02745191_0326 | SAMN02745191_1600 | Single-strand DNA-binding protein. | DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.987 |
| SJZ78206.1 | SJZ84949.1 | SAMN02745191_1617 | SAMN02745191_1820 | Single-strand DNA-binding protein. | single-stranded-DNA-specific exonuclease. | 0.743 |
| SJZ78206.1 | polA | SAMN02745191_1617 | SAMN02745191_1864 | Single-strand DNA-binding protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.574 |
| SJZ78206.1 | topA | SAMN02745191_1617 | SAMN02745191_1600 | Single-strand DNA-binding protein. | DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.987 |
| SJZ84770.1 | SJZ84919.1 | SAMN02745191_1814 | SAMN02745191_1818 | Penicillin-binding protein 2B. | Hypothetical protein. | 0.736 |
| SJZ84770.1 | SJZ84935.1 | SAMN02745191_1814 | SAMN02745191_1819 | Penicillin-binding protein 2B. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Belongs to the MurCDEF family. | 0.881 |
| SJZ84770.1 | SJZ84949.1 | SAMN02745191_1814 | SAMN02745191_1820 | Penicillin-binding protein 2B. | single-stranded-DNA-specific exonuclease. | 0.764 |
| SJZ84770.1 | polA | SAMN02745191_1814 | SAMN02745191_1864 | Penicillin-binding protein 2B. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.464 |
| SJZ84770.1 | secF | SAMN02745191_1814 | SAMN02745191_1817 | Penicillin-binding protein 2B. | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.714 |
| SJZ84770.1 | topA | SAMN02745191_1814 | SAMN02745191_1600 | Penicillin-binding protein 2B. | DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.615 |
| SJZ84919.1 | SJZ84770.1 | SAMN02745191_1818 | SAMN02745191_1814 | Hypothetical protein. | Penicillin-binding protein 2B. | 0.736 |
| SJZ84919.1 | SJZ84935.1 | SAMN02745191_1818 | SAMN02745191_1819 | Hypothetical protein. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Belongs to the MurCDEF family. | 0.995 |
| SJZ84919.1 | SJZ84949.1 | SAMN02745191_1818 | SAMN02745191_1820 | Hypothetical protein. | single-stranded-DNA-specific exonuclease. | 0.836 |
| SJZ84919.1 | secF | SAMN02745191_1818 | SAMN02745191_1817 | Hypothetical protein. | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.622 |
| SJZ84919.1 | topA | SAMN02745191_1818 | SAMN02745191_1600 | Hypothetical protein. | DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.552 |
| SJZ84935.1 | SJZ84770.1 | SAMN02745191_1819 | SAMN02745191_1814 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Belongs to the MurCDEF family. | Penicillin-binding protein 2B. | 0.881 |
| SJZ84935.1 | SJZ84919.1 | SAMN02745191_1819 | SAMN02745191_1818 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Belongs to the MurCDEF family. | Hypothetical protein. | 0.995 |
| SJZ84935.1 | SJZ84949.1 | SAMN02745191_1819 | SAMN02745191_1820 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Belongs to the MurCDEF family. | single-stranded-DNA-specific exonuclease. | 0.865 |
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