STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ86868.1Putative endonuclease. (86 aa)    
Predicted Functional Partners:
SJZ86853.1
Putative ABC transport system permease protein.
       0.784
SJZ86728.1
Transcriptional regulator, TetR family.
       0.773
SJZ86833.1
Putative ABC transport system ATP-binding protein.
       0.773
SJZ86884.1
Superoxide reductase.
       0.670
SJZ99577.1
tRNA1(Val) A37 N6-methylase TrmN6; Belongs to the methyltransferase superfamily.
  
  
 0.591
rsmI
16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.561
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
       0.445
SJZ35577.1
Pimeloyl-ACP methyl ester carboxylesterase.
    
  0.441
SJZ50357.1
Pimeloyl-ACP methyl ester carboxylesterase.
    
  0.441
SJZ54416.1
Esterase/lipase.
    
  0.441
Your Current Organism:
Anaerorhabdus furcosa
NCBI taxonomy Id: 118967
Other names: A. furcosa, ATCC 25662, Bacillus furcosus, Bacteroides furcosus, Fusiformis furcosus, Pseudobacterium furcosum, Ristella furcosa, VPI 3253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.