STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ91671.1HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). (300 aa)    
Predicted Functional Partners:
SJZ68176.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 0.994
SJZ35202.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.983
SJZ91915.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.913
SJZ91818.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
     0.886
SJZ75461.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 0.873
SJZ93932.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.873
SJZ39800.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 0.871
SJZ97612.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 0.871
SJZ91740.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 0.870
SKA00527.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.869
Your Current Organism:
Anaerorhabdus furcosa
NCBI taxonomy Id: 118967
Other names: A. furcosa, ATCC 25662, Bacillus furcosus, Bacteroides furcosus, Fusiformis furcosus, Pseudobacterium furcosum, Ristella furcosa, VPI 3253
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.