STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ93674.1Lipopolysaccharide cholinephosphotransferase. (270 aa)    
Predicted Functional Partners:
SJZ93679.1
ATP-binding cassette, subfamily F, member 3.
       0.762
pfp
6-phosphofructokinase 1; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.
       0.555
SJZ49682.1
Thiamine kinase.
 
   
 0.545
asnS
asparaginyl-tRNA synthetase.
       0.536
SJZ85910.1
ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA.
  
     0.468
SJZ59110.1
Hypothetical protein.
 
   
 0.434
SJZ37665.1
Uncharacterized conserved protein YybS, DUF2232 family.
  
     0.426
SJZ60039.1
ThiF family protein.
  
     0.416
SJZ69478.1
PD-(D/E)XK nuclease superfamily protein.
  
     0.405
Your Current Organism:
Anaerorhabdus furcosa
NCBI taxonomy Id: 118967
Other names: A. furcosa, ATCC 25662, Bacillus furcosus, Bacteroides furcosus, Fusiformis furcosus, Pseudobacterium furcosum, Ristella furcosa, VPI 3253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.