STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ98192.1Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (336 aa)    
Predicted Functional Partners:
SJZ98177.1
Galactokinase; Belongs to the GHMP kinase family.
 
 0.998
SJZ85519.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.960
SJZ41797.1
Beta-galactosidase.
 
 
 0.949
SJZ50930.1
PTS system, beta-glucosides-specific IIC component.
  
 
 0.929
SJZ43095.1
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
    
 0.802
SJZ55867.1
PTS system sucrose-specific IIB component, Glc family /PTS system sucrose-specific IIC component, Glc family /PTS system sucrose-specific IIA component, Glc family.
    
 0.802
rnc
Ribonuclease-3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
       0.773
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
       0.741
SJZ83830.1
Glucokinase.
  
 
 0.725
SJZ98242.1
Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling).
       0.721
Your Current Organism:
Anaerorhabdus furcosa
NCBI taxonomy Id: 118967
Other names: A. furcosa, ATCC 25662, Bacillus furcosus, Bacteroides furcosus, Fusiformis furcosus, Pseudobacterium furcosum, Ristella furcosa, VPI 3253
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