STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA00422.1Trk system potassium uptake protein TrkA. (146 aa)    
Predicted Functional Partners:
SKA00378.1
Trk system potassium uptake protein TrkH.
 
 
 0.990
SKA00398.1
Trk system potassium uptake protein TrkA.
 
     0.946
SKA01632.1
Trk system potassium uptake protein TrkH.
  
 
 0.828
SKA00441.1
Hypothetical protein.
       0.777
SJZ73594.1
NAD+ synthase (glutamine-hydrolysing); Belongs to the NAD synthetase family.
  
 
  0.771
SKA00482.1
Two-component system, OmpR family, sensor histidine kinase KdpD.
 
  
 0.653
SJZ76582.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.598
SKA00461.1
Two-component system, OmpR family, KDP operon response regulator KdpE.
 
   
 0.562
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
  
 
 0.540
SKA00347.1
Hypothetical protein.
       0.516
Your Current Organism:
Anaerorhabdus furcosa
NCBI taxonomy Id: 118967
Other names: A. furcosa, ATCC 25662, Bacillus furcosus, Bacteroides furcosus, Fusiformis furcosus, Pseudobacterium furcosum, Ristella furcosa, VPI 3253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.