STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA00461.1Two-component system, OmpR family, KDP operon response regulator KdpE. (231 aa)    
Predicted Functional Partners:
SKA00482.1
Two-component system, OmpR family, sensor histidine kinase KdpD.
 0.988
SJZ78597.1
Extracellular solute-binding protein, family 3.
 
 0.986
SJZ55392.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
 0.957
SJZ53879.1
Two-component system, OmpR family, sensor histidine kinase KdpD.
 0.949
SJZ68176.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.946
SJZ55572.1
Signal transduction histidine kinase.
 0.944
SJZ83607.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
 0.941
SJZ52359.1
Signal transduction histidine kinase.
 0.938
SKA01405.1
Signal transduction histidine kinase.
 0.935
SJZ86298.1
Two-component system, OmpR family, sensor histidine kinase VanS.
 0.933
Your Current Organism:
Anaerorhabdus furcosa
NCBI taxonomy Id: 118967
Other names: A. furcosa, ATCC 25662, Bacillus furcosus, Bacteroides furcosus, Fusiformis furcosus, Pseudobacterium furcosum, Ristella furcosa, VPI 3253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.