STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA01191.1Diguanylate cyclase (GGDEF) domain-containing protein. (367 aa)    
Predicted Functional Partners:
SJZ55392.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
 0.953
SJZ70298.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.922
SJZ91915.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.920
SJZ78597.1
Extracellular solute-binding protein, family 3.
 
 
 0.899
SJZ69829.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.886
SJZ43900.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.880
SJZ37924.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.879
SJZ49567.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.879
SJZ54223.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
 
 0.879
SJZ54391.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.879
Your Current Organism:
Anaerorhabdus furcosa
NCBI taxonomy Id: 118967
Other names: A. furcosa, ATCC 25662, Bacillus furcosus, Bacteroides furcosus, Fusiformis furcosus, Pseudobacterium furcosum, Ristella furcosa, VPI 3253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.