STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA01504.1ABC-2 type transport system ATP-binding protein. (236 aa)    
Predicted Functional Partners:
SKA01535.1
Putative ATP-binding cassette.
 
    0.950
SJZ55229.1
ABC-2 family transporter protein.
 
 0.898
SJZ53137.1
ABC-2 family transporter protein.
  
 0.814
SKA01471.1
DNA-binding transcriptional regulator, ArsR family.
     
 0.782
SKA01485.1
Uncharacterized membrane protein.
       0.773
SJZ51832.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
   
  0.764
SJZ55708.1
ABC-type multidrug transport system, ATPase and permease component.
 
 0.731
SJZ34718.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
   
 
0.696
SJZ41493.1
Putative lysine transport system permease protein.
   
 0.671
SJZ37389.1
Sodium transport system permease protein.
 
 
 0.646
Your Current Organism:
Anaerorhabdus furcosa
NCBI taxonomy Id: 118967
Other names: A. furcosa, ATCC 25662, Bacillus furcosus, Bacteroides furcosus, Fusiformis furcosus, Pseudobacterium furcosum, Ristella furcosa, VPI 3253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.