STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA01577.1Zinc transporter, ZIP family. (273 aa)    
Predicted Functional Partners:
SJZ49653.1
Cytochrome c-type biogenesis protein.
  
    0.654
SKA01596.1
Rubrerythrin.
       0.591
SJZ53904.1
Cu+-exporting ATPase.
  
  
 0.533
SJZ39219.1
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
     
 0.507
SJZ56399.1
Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.498
SKA01563.1
Alkyl sulfatase BDS1, metallo-beta-lactamase superfamily.
       0.470
SJZ68892.1
Alcohol dehydrogenase, class IV; Manually curated.
  
  
 0.431
Your Current Organism:
Anaerorhabdus furcosa
NCBI taxonomy Id: 118967
Other names: A. furcosa, ATCC 25662, Bacillus furcosus, Bacteroides furcosus, Fusiformis furcosus, Pseudobacterium furcosum, Ristella furcosa, VPI 3253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.