STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM24353.1Hippurate hydrolase. (386 aa)    
Predicted Functional Partners:
SDL40406.1
Glutamate synthase (NADPH) large subunit.
    
  0.856
SDM24382.1
Protein of unknown function.
 
     0.824
SDM24291.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.619
SDM24321.1
3-hydroxyisobutyrate dehydrogenase.
       0.549
dapD
2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.
  
  
 0.544
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
    
 0.464
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
    
  0.423
SDL39178.1
Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03.
 
  
  0.401
Your Current Organism:
Halomonas muralis
NCBI taxonomy Id: 119000
Other names: DSM 14789, H. muralis, Halomonas muralis Heyrman et al. 2002, Halomonas sp. LMG-19418, LMG 20969, LMG:20969
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.