STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM25751.1Tripartite-type tricarboxylate transporter, receptor component TctC. (320 aa)    
Predicted Functional Partners:
SDM25695.1
Putative tricarboxylic transport membrane protein.
    0.922
SDK76697.1
Putative tricarboxylic transport membrane protein.
 
    0.832
SDL24646.1
Putative tricarboxylic transport membrane protein.
 
    0.832
SDL26344.1
TctA family transporter.
 
    0.832
SDL39309.1
Putative tricarboxylic transport membrane protein.
 
    0.832
SDL51019.1
Putative tricarboxylic transport membrane protein.
 
    0.832
SDL96972.1
Putative tricarboxylic transport membrane protein.
 
    0.832
SDM04021.1
Putative tricarboxylic transport membrane protein.
 
    0.832
SDM09066.1
Putative tricarboxylic transport membrane protein.
 
    0.832
SDK83441.1
Putative tricarboxylic transport membrane protein.
 
    0.831
Your Current Organism:
Halomonas muralis
NCBI taxonomy Id: 119000
Other names: DSM 14789, H. muralis, Halomonas muralis Heyrman et al. 2002, Halomonas sp. LMG-19418, LMG 20969, LMG:20969
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.