STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM65377.1Hypothetical protein. (589 aa)    
Predicted Functional Partners:
SHM65389.1
Protein of unknown function.
       0.781
SHN03239.1
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.738
SHM75769.1
D-erythro-7,8-dihydroneopterin triphosphate epimerase.
     
 0.730
SHM65365.1
RES domain-containing protein.
 
     0.651
folE
GTP cyclohydrolase I.
    
 0.573
folE-2
GTP cyclohydrolase I.
    
 0.573
SHN22461.1
Choline-sulfatase.
 
  
  0.557
SHM69445.1
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI.
   
  
 0.524
SHM68140.1
3-phytase.
    
 0.522
SHN26978.1
Heterokaryon incompatibility protein Het-C.
  
     0.517
Your Current Organism:
Pseudomonas asturiensis
NCBI taxonomy Id: 1190415
Other names: CECT 8095, LMG 26898, LMG:26898, LPPA 221, P. asturiensis, Pseudomonas asturiensis Gonzalez et al. 2013, Pseudomonas sp. LPPA 221, Pseudomonas sp. LPPA 816
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.