STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM77112.1Amino acid ABC transporter membrane protein 2, PAAT family. (365 aa)    
Predicted Functional Partners:
SHM77100.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
0.999
SHM77137.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.999
SHM77077.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.998
SHN21581.1
L-glutamate ABC transporter ATP-binding protein.
 
 0.969
SHM55868.1
Polar amino acid transport system permease protein.
 
0.942
SHM48449.1
Polar amino acid transport system ATP-binding protein.
 
 0.938
SHM64630.1
Polar amino acid transport system ATP-binding protein.
 
 0.938
SHM54136.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.934
SHN05774.1
L-cystine ABC transporter ATP-binding protein.
 
 0.934
SHN23824.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.930
Your Current Organism:
Pseudomonas asturiensis
NCBI taxonomy Id: 1190415
Other names: CECT 8095, LMG 26898, LMG:26898, LPPA 221, P. asturiensis, Pseudomonas asturiensis Gonzalez et al. 2013, Pseudomonas sp. LPPA 221, Pseudomonas sp. LPPA 816
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