Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM54221.1 | SHN09224.1 | SAMN05216593_101443 | SAMN05216593_107175 | UvrD/REP helicase N-terminal domain-containing protein. | HDOD domain-containing protein. | 0.771 |
SHM54221.1 | SHN17491.1 | SAMN05216593_101443 | SAMN05216593_11189 | UvrD/REP helicase N-terminal domain-containing protein. | RHS repeat-associated core domain-containing protein. | 0.575 |
SHM54221.1 | SHN17517.1 | SAMN05216593_101443 | SAMN05216593_11193 | UvrD/REP helicase N-terminal domain-containing protein. | Pilin (type 1 fimbria component protein). | 0.524 |
SHM54221.1 | SHN17530.1 | SAMN05216593_101443 | SAMN05216593_11195 | UvrD/REP helicase N-terminal domain-containing protein. | Outer membrane autotransporter barrel domain-containing protein. | 0.528 |
SHM54221.1 | SHN20731.1 | SAMN05216593_101443 | SAMN05216593_11361 | UvrD/REP helicase N-terminal domain-containing protein. | Serine protease, subtilisin family. | 0.518 |
SHM54221.1 | SHN30658.1 | SAMN05216593_101443 | SAMN05216593_12739 | UvrD/REP helicase N-terminal domain-containing protein. | Hypothetical protein. | 0.772 |
SHM54221.1 | SHN30662.1 | SAMN05216593_101443 | SAMN05216593_12740 | UvrD/REP helicase N-terminal domain-containing protein. | Hypothetical protein. | 0.770 |
SHM54221.1 | SHN30671.1 | SAMN05216593_101443 | SAMN05216593_12741 | UvrD/REP helicase N-terminal domain-containing protein. | Hypothetical protein. | 0.845 |
SHN01063.1 | SHN09224.1 | SAMN05216593_105378 | SAMN05216593_107175 | Outer membrane autotransporter barrel domain-containing protein. | HDOD domain-containing protein. | 0.595 |
SHN01063.1 | SHN17491.1 | SAMN05216593_105378 | SAMN05216593_11189 | Outer membrane autotransporter barrel domain-containing protein. | RHS repeat-associated core domain-containing protein. | 0.556 |
SHN01063.1 | SHN17517.1 | SAMN05216593_105378 | SAMN05216593_11193 | Outer membrane autotransporter barrel domain-containing protein. | Pilin (type 1 fimbria component protein). | 0.657 |
SHN01063.1 | SHN30658.1 | SAMN05216593_105378 | SAMN05216593_12739 | Outer membrane autotransporter barrel domain-containing protein. | Hypothetical protein. | 0.571 |
SHN01063.1 | SHN30662.1 | SAMN05216593_105378 | SAMN05216593_12740 | Outer membrane autotransporter barrel domain-containing protein. | Hypothetical protein. | 0.522 |
SHN01063.1 | SHN30671.1 | SAMN05216593_105378 | SAMN05216593_12741 | Outer membrane autotransporter barrel domain-containing protein. | Hypothetical protein. | 0.551 |
SHN09224.1 | SHM54221.1 | SAMN05216593_107175 | SAMN05216593_101443 | HDOD domain-containing protein. | UvrD/REP helicase N-terminal domain-containing protein. | 0.771 |
SHN09224.1 | SHN01063.1 | SAMN05216593_107175 | SAMN05216593_105378 | HDOD domain-containing protein. | Outer membrane autotransporter barrel domain-containing protein. | 0.595 |
SHN09224.1 | SHN17491.1 | SAMN05216593_107175 | SAMN05216593_11189 | HDOD domain-containing protein. | RHS repeat-associated core domain-containing protein. | 0.680 |
SHN09224.1 | SHN17517.1 | SAMN05216593_107175 | SAMN05216593_11193 | HDOD domain-containing protein. | Pilin (type 1 fimbria component protein). | 0.673 |
SHN09224.1 | SHN17530.1 | SAMN05216593_107175 | SAMN05216593_11195 | HDOD domain-containing protein. | Outer membrane autotransporter barrel domain-containing protein. | 0.691 |
SHN09224.1 | SHN20731.1 | SAMN05216593_107175 | SAMN05216593_11361 | HDOD domain-containing protein. | Serine protease, subtilisin family. | 0.607 |
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