STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN24699.1Putative spermidine/putrescine transport system substrate-binding protein. (355 aa)    
Predicted Functional Partners:
SHN24680.1
Putative spermidine/putrescine transport system permease protein.
 
  0.978
SHN24692.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
 
    0.961
SHN24685.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.953
SHN24671.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.917
SHN23994.1
Sensory transduction protein kinase AlgZ.
   
   0.869
SHN23674.1
iron(III) transport system permease protein.
  
 
 0.856
SHN03866.1
Putative spermidine/putrescine transport system permease protein.
 
  
  0.712
SHN00551.1
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.708
SHN23743.1
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.708
SHN00787.1
Chemotaxis protein MotB.
    
   0.679
Your Current Organism:
Pseudomonas asturiensis
NCBI taxonomy Id: 1190415
Other names: CECT 8095, LMG 26898, LMG:26898, LPPA 221, P. asturiensis, Pseudomonas asturiensis Gonzalez et al. 2013, Pseudomonas sp. LPPA 221, Pseudomonas sp. LPPA 816
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.