STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN25645.1Cytochrome c. (122 aa)    
Predicted Functional Partners:
SHN11596.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.999
SHN22600.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 0.999
SHN11576.1
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
  
 0.998
SHN11587.1
Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.995
SHN00963.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
   
 0.991
SHN01001.1
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 0.973
SHM48990.1
Cytochrome o ubiquinol oxidase subunit 1.
  
 0.968
SHM49011.1
Cytochrome o ubiquinol oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 0.968
SHM78484.1
Cytochrome bo3 quinol oxidase subunit 1 apoprotein; Belongs to the heme-copper respiratory oxidase family.
  
 0.968
SHN22609.1
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
 0.968
Your Current Organism:
Pseudomonas asturiensis
NCBI taxonomy Id: 1190415
Other names: CECT 8095, LMG 26898, LMG:26898, LPPA 221, P. asturiensis, Pseudomonas asturiensis Gonzalez et al. 2013, Pseudomonas sp. LPPA 221, Pseudomonas sp. LPPA 816
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