STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN31490.1Zinc transport system ATP-binding protein. (254 aa)    
Predicted Functional Partners:
SHN31484.1
Zinc transport system permease protein.
 
 0.999
SHN31495.1
Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.995
SHN22681.1
Zinc transport system permease protein.
 
 0.992
SHN31477.1
ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA.
 
 
 0.991
SHM51711.1
Zinc/manganese transport system permease protein.
 
 0.984
SHN31508.1
Hypothetical protein.
 
    0.975
SHN22696.1
Zinc transport system substrate-binding protein.
 
 
 0.969
SHN31501.1
Hypothetical protein.
  
    0.922
SHN31512.1
Hypothetical protein.
  
  
 0.921
SHM51728.1
Zinc/manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.904
Your Current Organism:
Pseudomonas asturiensis
NCBI taxonomy Id: 1190415
Other names: CECT 8095, LMG 26898, LMG:26898, LPPA 221, P. asturiensis, Pseudomonas asturiensis Gonzalez et al. 2013, Pseudomonas sp. LPPA 221, Pseudomonas sp. LPPA 816
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