STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD13037.1ABC-2 type transport system permease protein. (270 aa)    
Predicted Functional Partners:
SDD13065.1
ABC-2 type transport system ATP-binding protein.
 
  0.971
SDD13091.1
Hypothetical protein.
 
     0.948
SDC45653.1
ABC-2 type transport system ATP-binding protein.
 
  0.725
SDC02390.1
ABC-2 type transport system ATP-binding protein.
 
  0.650
SDD13111.1
Hypothetical protein.
       0.628
SDC52828.1
ABC-2 type transport system ATP-binding protein.
 
  0.621
SDC02414.1
Hypothetical protein.
 
  0.619
SDC81523.1
ABC-2 type transport system ATP-binding protein.
 
  0.612
SDC60976.1
ABC-2 type transport system ATP-binding protein.
 
  0.604
SDC04330.1
ABC-2 type transport system ATP-binding protein.
  
  0.546
Your Current Organism:
Geodermatophilus telluris
NCBI taxonomy Id: 1190417
Other names: CCUG 62764, DSM 45421, G. telluris, Geodermatophilus sp. DSM 45421, Geodermatophilus telluris Montero-Calasanz et al. 2013 emend. Montero-Calasanz et al. 2017, strain CF9/1/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.