STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MY04_2338Putative diguanylate phosphodiesterase with Response Regulator Receiver modulation. (350 aa)    
Predicted Functional Partners:
MY04_2337
Two-component hybrid sensor and regulator.
 
 0.976
arcB-3
Signal transduction histidine kinase with CheB and CheR activity.
 
 0.947
MY04_1405
Sensor histidine kinase/response regulator.
 
 0.940
MY04_4993
Signal transduction histidine-protein kinase barA.
 
0.926
MY04_1284
Cyclic nucleotide-binding domain protein.
   
  0.904
MY04_2335
ATP-binding region, ATPase-like:Histidine kinase A-like protein.
 
 0.821
MY04_2662
Signal-transducing histidine kinase, putative.
 
 0.797
MY04_4300
Multi-sensor hybrid histidine kinase.
 
0.793
MY04_2336
CheY-like receiver.
 
 
0.786
MY04_1572
Two-component hybrid sensor and regulator.
 
 0.785
Your Current Organism:
Flammeovirga sp. MY04
NCBI taxonomy Id: 1191459
Other names: F. sp. MY04, Flammeovirga sp. CGMCC 2777
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