STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhaAL-rhamnose isomerase; Belongs to the rhamnose isomerase family. (423 aa)    
Predicted Functional Partners:
MROS_0090
Carbohydrate kinase FGGY.
 
 0.998
MROS_0076
L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose.
 
 
 0.992
MROS_0075
L-rhamnose/H+ symporter.
 
  
 0.871
MROS_2029
Xylulose kinase.
  
  
 0.820
MROS_0077
Glycosyl hydrolase family 88.
       0.656
MROS_0078
WD40 domain-containing protein.
       0.549
MROS_0079
Hypothetical protein.
  
    0.502
MROS_0073
Glycoside hydrolase family 28; Belongs to the glycosyl hydrolase 28 family.
  
    0.439
fucI
L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose.
  
   
 0.428
MROS_0072
PKD domain-containing protein.
       0.427
Your Current Organism:
Melioribacter roseus
NCBI taxonomy Id: 1191523
Other names: M. roseus P3M-2, Melioribacter roseus P3M-2, Melioribacter roseus str. P3M-2, Melioribacter roseus strain P3M-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.