STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MROS_0077Glycosyl hydrolase family 88. (415 aa)    
Predicted Functional Partners:
MROS_0079
Hypothetical protein.
 
    0.880
MROS_0076
L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose.
 
     0.853
MROS_2607
Glycoside hydrolase family 28; Belongs to the glycosyl hydrolase 28 family.
     0.841
MROS_0073
Glycoside hydrolase family 28; Belongs to the glycosyl hydrolase 28 family.
     0.820
MROS_2351
exo-poly-alpha-D-galacturonosidase; Belongs to the glycosyl hydrolase 28 family.
     0.777
MROS_0075
L-rhamnose/H+ symporter.
 
     0.761
MROS_0879
Pectinesterase.
     0.755
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.750
MROS_0087
Carbohydrate binding module (family 6).
     0.745
MROS_2344
Hypothetical protein.
 
     0.744
Your Current Organism:
Melioribacter roseus
NCBI taxonomy Id: 1191523
Other names: M. roseus P3M-2, Melioribacter roseus P3M-2, Melioribacter roseus str. P3M-2, Melioribacter roseus strain P3M-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.