STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MROS_0087Carbohydrate binding module (family 6). (1017 aa)    
Predicted Functional Partners:
MROS_0079
Hypothetical protein.
     0.776
MROS_0979
Hypothetical protein.
  
     0.754
MROS_0077
Glycosyl hydrolase family 88.
     0.745
MROS_0083
Hypothetical protein.
 
     0.739
MROS_0084
Glycosyl hydrolases family 2, sugar binding domain protein.
 
   
 0.736
MROS_2087
Glycosyl hydrolase, family 43.
  
     0.736
MROS_2345
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.734
MROS_0086
Glycoside hydrolase family 31; Belongs to the glycosyl hydrolase 31 family.
 
     0.676
MROS_1505
Pectate lyase.
  
     0.640
MROS_2342
Pectate lyase.
  
     0.637
Your Current Organism:
Melioribacter roseus
NCBI taxonomy Id: 1191523
Other names: M. roseus P3M-2, Melioribacter roseus P3M-2, Melioribacter roseus str. P3M-2, Melioribacter roseus strain P3M-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.