STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MROS_0516Peptidase S8 and S53, subtilisin, kexin, sedolisin. (540 aa)    
Predicted Functional Partners:
MROS_1729
Cell division FtsK/SpoIIIE.
   
 
 0.766
MROS_0631
Hypothetical protein.
  
     0.657
MROS_1358
Hypothetical protein.
  
     0.626
MROS_1872
WD40 domain-containing protein.
 
  
 0.607
MROS_0963
Hypothetical protein.
  
     0.589
MROS_0965
TonB-dependent receptor.
  
 
   0.589
MROS_1356
TonB-dependent receptor.
  
 
   0.569
MROS_2348
Hypothetical protein.
  
     0.554
MROS_1276
Hypothetical protein.
  
    0.546
MROS_1889
Hypothetical protein.
  
     0.538
Your Current Organism:
Melioribacter roseus
NCBI taxonomy Id: 1191523
Other names: M. roseus P3M-2, Melioribacter roseus P3M-2, Melioribacter roseus str. P3M-2, Melioribacter roseus strain P3M-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.