STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MROS_0626ABC-type cytochrome c biogenesis transport system permease component C. (234 aa)    
Predicted Functional Partners:
MROS_1625
Cytochrome c-type biogenesis protein CcmB.
 
 0.999
MROS_0624
Cytochrome c-type biogenesis protein E; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
 
 
 0.998
MROS_0623
Cytochrome c-type biogenesis protein F.
 
  
 0.953
MROS_1624
ABC transporter-like protein.
 
  
  0.851
MROS_0625
Hypothetical protein.
       0.777
MROS_0610
Uroporphyrinogen-III synthase HemD; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
    0.689
tatC
Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Belongs to the TatC family.
 
   
 0.572
MROS_0865
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
    0.568
MROS_1872
WD40 domain-containing protein.
 
     0.553
MROS_2577
WD40 domain protein beta Propeller.
 
     0.524
Your Current Organism:
Melioribacter roseus
NCBI taxonomy Id: 1191523
Other names: M. roseus P3M-2, Melioribacter roseus P3M-2, Melioribacter roseus str. P3M-2, Melioribacter roseus strain P3M-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.