STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MROS_0961Arabinogalactan endo-1,4-beta-galactosidase. (741 aa)    
Predicted Functional Partners:
MROS_0960
Glycosyl hydrolase family 5.
 
  
 0.831
MROS_0962
Hypothetical protein.
 
    
0.786
MROS_0959
Aldose 1-epimerase.
  
    0.751
MROS_0963
Hypothetical protein.
 
     0.723
MROS_2623
Glycosyl hydrolase family 26; Belongs to the glycosyl hydrolase 26 family.
  
   
 0.667
MROS_2087
Glycosyl hydrolase, family 43.
  
  
 0.640
MROS_0964
Hypothetical protein.
       0.618
MROS_0967
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
 
  
 0.616
MROS_0079
Hypothetical protein.
 
  
 0.611
MROS_0965
TonB-dependent receptor.
       0.573
Your Current Organism:
Melioribacter roseus
NCBI taxonomy Id: 1191523
Other names: M. roseus P3M-2, Melioribacter roseus P3M-2, Melioribacter roseus str. P3M-2, Melioribacter roseus strain P3M-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.