MROS_1105 protein (Melioribacter roseus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MROS_1105

Nitrous-oxide reductase accessory protein NosL. (336 aa)

Predicted Functional Partners:

MROS_1106

0.999

MROS_1108

0.998

MROS_1107

0.993

MROS_1104

0.981

MROS_1103

0.976

MROS_0851

0.915

MROS_1109

0.906

MROS_1102

0.891

MROS_1101

0.823

MROS_1637

0.711

Your Current Organism:

Melioribacter roseus

NCBI taxonomy Id: 1191523
Other names: M. roseus P3M-2, Melioribacter roseus P3M-2, Melioribacter roseus str. P3M-2, Melioribacter roseus strain P3M-2

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
MROS_0851	MROS_1104	Membrane protein.	Nitrous oxide reductase protein NosZ.	0.639
MROS_0851	MROS_1105	Membrane protein.	Nitrous-oxide reductase accessory protein NosL.	0.915
MROS_0851	MROS_1106	Membrane protein.	Nitrous oxide reductase periplasmic copper-binding protein NosD.	0.889
MROS_0851	MROS_1107	Membrane protein.	Copper-transport ATP-binding protein NosF.	0.842
MROS_1101	MROS_1102	BadM/Rrf2 family transcriptional regulator.	Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.	0.679
MROS_1101	MROS_1103	BadM/Rrf2 family transcriptional regulator.	Cytochrome c.	0.880
MROS_1101	MROS_1104	BadM/Rrf2 family transcriptional regulator.	Nitrous oxide reductase protein NosZ.	0.756
MROS_1101	MROS_1105	BadM/Rrf2 family transcriptional regulator.	Nitrous-oxide reductase accessory protein NosL.	0.823
MROS_1101	MROS_1106	BadM/Rrf2 family transcriptional regulator.	Nitrous oxide reductase periplasmic copper-binding protein NosD.	0.823
MROS_1101	MROS_1107	BadM/Rrf2 family transcriptional regulator.	Copper-transport ATP-binding protein NosF.	0.820
MROS_1101	MROS_1108	BadM/Rrf2 family transcriptional regulator.	Nitrous oxide metabolic protein NosY.	0.822
MROS_1101	MROS_1109	BadM/Rrf2 family transcriptional regulator.	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.	0.798
MROS_1102	MROS_1101	Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.	BadM/Rrf2 family transcriptional regulator.	0.679
MROS_1102	MROS_1103	Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.	Cytochrome c.	0.937
MROS_1102	MROS_1104	Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.	Nitrous oxide reductase protein NosZ.	0.925
MROS_1102	MROS_1105	Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.	Nitrous-oxide reductase accessory protein NosL.	0.891
MROS_1102	MROS_1106	Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.	Nitrous oxide reductase periplasmic copper-binding protein NosD.	0.886
MROS_1102	MROS_1107	Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.	Copper-transport ATP-binding protein NosF.	0.822
MROS_1102	MROS_1108	Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.	Nitrous oxide metabolic protein NosY.	0.881
MROS_1102	MROS_1637	Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.	Hemerythrin HHE cation binding domain protein.	0.605