STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MROS_1842Glycoside hydrolase family 2 sugar binding protein; Belongs to the glycosyl hydrolase 2 family. (836 aa)    
Predicted Functional Partners:
MROS_2611
Alpha-galactosidase.
  
 
 0.907
MROS_0117
Glycosyl hydrolase, family 30; Belongs to the glycosyl hydrolase 30 family.
  
 
  0.902
MROS_0639
Ceramide glucosyltransferase, putative.
     
  0.900
MROS_1840
Phosphoserine phosphatase.
 
     0.886
MROS_1839
S-isoprenylcysteine methyltransferase-like protein.
 
     0.836
MROS_0565
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
  
  
  0.824
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.806
smc
Smc family protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.797
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
       0.792
MROS_1838
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
       0.792
Your Current Organism:
Melioribacter roseus
NCBI taxonomy Id: 1191523
Other names: M. roseus P3M-2, Melioribacter roseus P3M-2, Melioribacter roseus str. P3M-2, Melioribacter roseus strain P3M-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.