STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MROS_1941Type I secretion outer membrane protein. (490 aa)    
Predicted Functional Partners:
MROS_1940
Secretion protein HlyD.
 
 0.973
MROS_1938
Putative transporter.
 
   
 0.879
MROS_1939
Transporter, putative.
 
   
 0.852
MROS_1937
Hypothetical protein.
       0.773
MROS_1942
Transcriptional regulator, TetR family.
 
   
 0.707
MROS_0942
Secretion protein HlyD.
 
 
 0.664
MROS_2281
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.660
MROS_0831
Hypothetical protein.
  
     0.607
MROS_0502
Hypothetical protein.
  
     0.595
MROS_1943
Putative signal peptide protein.
 
  
 0.592
Your Current Organism:
Melioribacter roseus
NCBI taxonomy Id: 1191523
Other names: M. roseus P3M-2, Melioribacter roseus P3M-2, Melioribacter roseus str. P3M-2, Melioribacter roseus strain P3M-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.