STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MROS_1993Outer membrane assembly lipoprotein YfiO. (990 aa)    
Predicted Functional Partners:
MROS_2577
WD40 domain protein beta Propeller.
 
  
 0.897
MROS_1872
WD40 domain-containing protein.
 
  
 0.880
hisS
histidyl-tRNA synthetase.
  
    0.844
MROS_1997
MotA/TolQ/ExbB proton channel.
 
  
 0.831
MROS_2576
Pyrrolo-quinoline quinone.
 
    0.830
MROS_0891
Hypothetical protein.
 
  
 0.818
MROS_1953
Metallophosphoesterase.
 
    0.800
MROS_1998
Biopolymer transport protein ExbD/TolR.
 
  
 0.794
MROS_1994
Hypothetical protein.
       0.777
MROS_1996
Hypothetical protein.
     
 0.766
Your Current Organism:
Melioribacter roseus
NCBI taxonomy Id: 1191523
Other names: M. roseus P3M-2, Melioribacter roseus P3M-2, Melioribacter roseus str. P3M-2, Melioribacter roseus strain P3M-2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.