STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MROS_2087Glycosyl hydrolase, family 43. (706 aa)    
Predicted Functional Partners:
MROS_2088
Glycoside hydrolase family 43.
 
  
0.984
MROS_2090
Glucuronoarabinoxylan endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 30 family.
  
 0.966
MROS_2093
Alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
0.959
MROS_2091
Xylanase.
 
   
 0.933
MROS_2089
Hypothetical protein.
 
     0.885
MROS_0564
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
  
  0.871
MROS_2085
Lipolytic protein G-D-S-L family.
     0.855
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.850
MROS_2092
Hypothetical protein.
 
   
 0.817
MROS_2495
Family 10 endo-beta-xylanase.
   
 0.814
Your Current Organism:
Melioribacter roseus
NCBI taxonomy Id: 1191523
Other names: M. roseus P3M-2, Melioribacter roseus P3M-2, Melioribacter roseus str. P3M-2, Melioribacter roseus strain P3M-2
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