STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MROS_2239Putative muconate cycloisomerase. (356 aa)    
Predicted Functional Partners:
MROS_2240
Fatty acid hydroxylase.
       0.686
MROS_2241
Glycoside hydrolase family 9.
  
    0.543
MROS_1446
O-succinylbenzoic acid (OSB) synthetase.
  
     0.531
MROS_2622
Peptidase U61, LD-carboxypeptidase A.
 
  
 0.453
MROS_2238
Hypothetical protein.
       0.450
MROS_2550
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase.
 
     0.446
MROS_1698
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
    0.415
Your Current Organism:
Melioribacter roseus
NCBI taxonomy Id: 1191523
Other names: M. roseus P3M-2, Melioribacter roseus P3M-2, Melioribacter roseus str. P3M-2, Melioribacter roseus strain P3M-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.