STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MROS_2347Fibronectin type III domain protein. (701 aa)    
Predicted Functional Partners:
MROS_2348
Hypothetical protein.
       0.757
MROS_2349
Glycosyl hydrolase family 88.
       0.716
MROS_2350
Hypothetical protein.
       0.716
MROS_2351
exo-poly-alpha-D-galacturonosidase; Belongs to the glycosyl hydrolase 28 family.
       0.716
MROS_2346
TonB-dependent receptor.
       0.616
MROS_2344
Hypothetical protein.
       0.514
MROS_2345
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
       0.514
MROS_2352
Pectic acid lyase.
       0.499
MROS_2353
Pectinesterase.
       0.499
Your Current Organism:
Melioribacter roseus
NCBI taxonomy Id: 1191523
Other names: M. roseus P3M-2, Melioribacter roseus P3M-2, Melioribacter roseus str. P3M-2, Melioribacter roseus strain P3M-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.