STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MROS_2660TonB-dependent outer membrane receptor. (602 aa)    
Predicted Functional Partners:
MROS_1425
TonB-dependent receptor.
  
     0.672
MROS_2661
Hypothetical protein.
       0.581
MROS_2401
Hypothetical protein.
  
     0.555
MROS_2658
Ribosomal protein L14.
       0.539
MROS_2659
GlcG.
       0.539
MROS_0853
Major facilitator superfamily mfs_1.
  
     0.527
MROS_0328
Major facilitator superfamily transporter.
  
    0.500
MROS_0129
TonB protein.
 
 
 
 0.465
MROS_1998
Biopolymer transport protein ExbD/TolR.
 
   
 0.460
MROS_1224
Glycosyl transferase, group 2 family.
  
     0.458
Your Current Organism:
Melioribacter roseus
NCBI taxonomy Id: 1191523
Other names: M. roseus P3M-2, Melioribacter roseus P3M-2, Melioribacter roseus str. P3M-2, Melioribacter roseus strain P3M-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.