STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000331575_01044Unannotated protein. (179 aa)    
Predicted Functional Partners:
GCA_000331575_01045
Unannotated protein.
  
  
 0.907
GCA_000331575_02902
Unannotated protein.
  
  
 0.889
GCA_000331575_02901
Unannotated protein.
   
    0.821
GCA_000331575_02909
Unannotated protein.
   
    0.808
GCA_000331575_02904
Unannotated protein.
   
    0.806
GCA_000331575_02903
Unannotated protein.
   
    0.773
GCA_000331575_02829
Unannotated protein.
  
    0.751
GCA_000331575_02906
Unannotated protein.
  
    0.751
GCA_000331575_01043
Unannotated protein.
  
  
 0.740
GCA_000331575_01643
Unannotated protein.
  
    0.707
Your Current Organism:
Bacillus oryziterrae
NCBI taxonomy Id: 1191699
Other names: B. oryziterrae, Bacillus oryziterrae Bao et al. 2017, Bacillus sp. ZYK, CGMCC 1.5179, DSM 26460, strain ZYK
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.