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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_0027Periplasmic protein involved in polysaccharide export. (198 aa)    
Predicted Functional Partners:
CAP_5722
Non-specific protein-tyrosine kinase.
 
 0.998
CAP_3465
Hypothetical protein.
 
 0.997
CAP_6300
Hypothetical protein.
 
 0.879
CAP_5763
UDP-N-acetylglucosamine 4,6-dehydratase.
  
 
 0.828
CAP_0026
Hypothetical protein.
       0.809
CAP_6296
Hypothetical protein.
 
 
 0.793
CAP_5148
Lipid carrier : UDP-N-acetylgalactosaminyltransferase.
 
 
 0.790
CAP_3467
Polysaccharide export protein.
  
  
 
0.781
CAP_5712
Beta-xylosidase.
  
  
 0.660
CAP_6301
Tyrosine-protein kinase EpsD.
 
 0.657
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.