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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_0126Flagellar motor rotation protein MotB. (270 aa)    
Predicted Functional Partners:
CAP_2347
Chemotaxis protein methyltransferase CheR.
 
 
 0.896
CAP_4269
CheA signal transduction histidine kinase.
 
  
 0.866
CAP_4027
Chemotaxis protein methyltransferase CheR; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
  
 0.863
CAP_0917
Signal transduction histidine kinase CheA.
 
  
 0.861
CAP_3048
RNA polymerase sigma factor for flagellar operon; Belongs to the sigma-70 factor family.
 
  
 0.856
CAP_8810
Signal transduction histidine kinase CheA.
 
  
 0.848
CAP_6768
Signal transduction histidine kinase CheA.
 
  
 0.846
CAP_1499
Signal transduction histidine kinase CheA.
 
  
 0.834
CAP_5693
Two-component hybrid sensor and regulator.
  
  
 0.820
CAP_2604
OmpA domain protein.
  
 
 0.806
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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