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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_0250Acyl-CoA dehydrogenase, short-chain specific. (391 aa)    
Predicted Functional Partners:
CAP_1339
Malonyl CoA-acyl carrier protein transacylase.
  
 0.941
CAP_5013
Electron transfer flavoprotein, alpha subunit.
 0.920
CAP_6012
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.914
CAP_8401
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.913
CAP_0724
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.912
CAP_1986
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.908
CAP_1692
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.895
CAP_0885
Glutaryl-CoA dehydrogenase.
  
  
 
0.884
CAP_1987
Enoyl-CoA hydratase in isoleucine degradation.
  
 0.866
CAP_5012
Electron transfer flavoprotein, beta subunit.
 
 
 0.849
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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