Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAP_0370Microsomal dipeptidase. (354 aa)    
Predicted Functional Partners:
CAP_0371
Hypothetical protein.
       0.790
CAP_0369
Hypothetical protein.
       0.585
CAP_0368
Hypothetical protein.
       0.583
CAP_5153
Long-chain-fatty-acid--CoA ligase.
  
  
 0.536
CAP_2285
Sigma54 specific transcriptional regulator, Fis family.
  
  
 0.485
CAP_0677
Hypothetical protein.
  
  
 0.484
CAP_0372
Hypothetical protein.
       0.468
CAP_3189
Putative L-ORNITHINE 5-MONOOXYGENASE OXIDOREDUCTASE PROTEIN.
   
  
 0.463
CAP_7824
Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase.
   
    0.451
CAP_0388
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
    0.450
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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