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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_0380dCMP deaminase. (177 aa)    
Predicted Functional Partners:
tdk
Thymidine kinase.
  
 
 0.946
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
    
 0.941
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
  
 0.937
CAP_1589
Deoxyadenosine kinase.
   
 0.933
cmk
Cytidylate kinase.
    
  0.916
CAP_4135
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
    
  0.913
CAP_8159
HAD superfamily (Subfamily IG) hydrolase, 5'-Nucleotidase.
    
  0.910
CAP_7360
5'-nucleotidase.
    
  0.904
CAP_2635
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
    
  0.903
CAP_6894
HAD superfamily (Subfamily IG) hydrolase, 5'-nucleotidase.
    
  0.852
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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