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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_0446Hypothetical protein. (327 aa)    
Predicted Functional Partners:
CAP_0444
Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
 
  
 0.929
CAP_6601
Glutamate synthase [NADPH] large chain.
    
 0.917
CAP_0445
Hypothetical protein.
 
  
  0.903
CAP_3457
Hypothetical protein.
 
  
  0.809
CAP_5451
Peroxiredoxin family protein/glutaredoxin.
    
 0.789
CAP_3851
ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp.
 
   
 0.769
CAP_6932
Hypothetical protein.
 
     0.766
CAP_0066
Glutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.
    
 0.660
CAP_7238
Putative alpha-dextrin endo-1, 6-alpha-glucosidase.
 
     0.618
CAP_6874
Surface protein.
 
     0.586
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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