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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_0618Outer membrane protein assembly factor YaeT precursor. (746 aa)    
Predicted Functional Partners:
CAP_4597
Outer membrane protein H precursor.
 
  
 0.719
CAP_6547
Outer membrane protein H precursor.
 
  
 0.715
CAP_7364
Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage.
 
  
 0.699
tsf
Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
  
  
 0.664
CAP_7216
Maltose/maltodextrin ABC transporter, permease protein MalF.
    
   0.656
CAP_7928
Competence protein ComL precursor.
 
 
 0.653
CAP_1777
Membrane-associated zinc metalloprotease.
  
  
 0.636
CAP_7808
Zinc protease.
  
  
 0.636
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
  
    0.634
CAP_2010
Hypothetical protein.
  
  
 0.616
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.