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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_0620Hypothetical protein. (375 aa)    
Predicted Functional Partners:
CAP_6601
Glutamate synthase [NADPH] large chain.
    
  0.910
CAP_0619
Hypothetical protein.
       0.782
CAP_5153
Long-chain-fatty-acid--CoA ligase.
  
 
  0.593
CAP_5373
Molybdopterin binding protein; Belongs to the CinA family.
    
  0.570
CAP_5339
Long-chain-fatty-acid--CoA ligase.
  
 
  0.548
CAP_2498
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.529
CAP_0549
Long-chain-fatty-acid--CoA ligase.
  
    0.522
guaA
GMP synthase/glutamine-hydrolyzing protein; Catalyzes the synthesis of GMP from XMP.
    
  0.514
CAP_6335
Long-chain-fatty-acid--CoA ligase.
  
    0.513
CAP_8747
Long-chain-fatty-acid--CoA ligase.
  
    0.504
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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