Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CAP_0652Pyoverdine chromophore precursor synthetase PvdL. (280 aa)    
Predicted Functional Partners:
CAP_3203
Malonyl CoA-acyl carrier protein transacylase.
 
 0.991
CAP_5153
Long-chain-fatty-acid--CoA ligase.
 
 0.991
CAP_3199
Malonyl CoA-acyl carrier protein transacylase.
 
 0.989
CAP_3204
Malonyl CoA-acyl carrier protein transacylase.
 
 0.985
CAP_3198
Malonyl CoA-acyl carrier protein transacylase.
 
 0.982
CAP_0469
Malonyl CoA-acyl carrier protein transacylase.
 
 0.980
CAP_1339
Malonyl CoA-acyl carrier protein transacylase.
 
 0.976
CAP_2768
Malonyl CoA-acyl carrier protein transacylase.
 
 0.969
CAP_6335
Long-chain-fatty-acid--CoA ligase.
 
 0.962
CAP_2164
Long-chain-fatty-acid--CoA ligase.
  
 0.955
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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