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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_0860Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. (667 aa)    
Predicted Functional Partners:
CAP_3450
Agmatinase; Belongs to the arginase family.
  
 
 0.940
argH
Argininosuccinate lyase.
     
 0.930
CAP_7182
Arginine N-succinyltransferase.
  
  
  0.924
CAP_4515
Agmatine deiminase; Belongs to the agmatine deiminase family.
 
  
 0.889
CAP_8753
Arginase; Belongs to the arginase family.
  
 
 0.889
CAP_4514
Agmatine deiminase; Belongs to the agmatine deiminase family.
 
  
 0.887
CAP_3767
Hypothetical protein.
    
 0.851
CAP_4699
Guanidinobutyrase; Belongs to the arginase family.
  
 
 0.790
CAP_0859
ABC transporter involved in cytochrome c biogenesis, CcmB subunit; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.
       0.789
speE
Spermidine synthase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the spermidine/spermine synthase family.
    
 0.688
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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