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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP_1016Glucan endo-1,3-beta-glucosidase A1. (455 aa)    
Predicted Functional Partners:
CAP_1015
Endo-1,4-beta-xylanase A precursor.
 
    
0.710
CAP_3207
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.680
CAP_5636
Putative integral membrane protein.
  
     0.633
CAP_8189
Extracellular protease domain protein.
  
     0.625
CAP_7959
Hypothetical protein.
  
     0.572
CAP_7061
WD domain G-beta repeat/PBS lyase HEAT-like repeat protein.
  
     0.565
CAP_8036
Hypothetical protein.
  
     0.565
CAP_5131
Hypothetical protein.
  
   
 0.557
CAP_2493
Adventurous gliding motility protein Q.
  
     0.544
CAP_4371
Beta-hexosaminidase.
 
  
  0.539
Your Current Organism:
Chondromyces apiculatus
NCBI taxonomy Id: 1192034
Other names: C. apiculatus DSM 436, Chondromyces apiculatus Cm a2, Chondromyces apiculatus DSM 436, Chondromyces apiculatus str. DSM 436, Chondromyces apiculatus strain DSM 436
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